The list (i.e., summary output) file produced by example3 ought to, aside from rounding error, look like the example3.lst file included with the GENBLIS distributions. The file has been included below for convenience.
Output produced by GENBLIS-1.11.4
Copyright (C) 1998 Walter R. Mebane Jr. and Jasjeet S. Sekhon.
Program distributed under the GNU General Public License. See documentation for details.
Please see http://data.fas.harvard.edu/jsekhon/ for latest binaries and information.
Basic program, data and model parameters:
model specification file = example3
type of matrix to analyze = covariance matrix
input data file (group 1) = example1.dat
input data file (group 2) = example2.dat
number of bootstrap resamples = 1000
no output record file
no input record file (default)
number of cases = 1266
number of observed variables = 12
number in group 1 = 6 (variables 1 to 6)
number in group 2 = 6 (variables 7 to 12)
number of latent variables = 2
genoud random seed = 0
bootstrap random seed = 707070
boundary-hit threshold = 1.0000000000e-09
number of parameters to estimate = 24
the degrees of freedom = 18
total information = 42
the number of equality constraints = 0
Out of bounds values are not used (default).
There are no user supplied starting values.
Model Specifications:
specified fixed parameters (other fixed parameters = 0.0)
LY 3 1 = 1.000000
LY 9 2 = 1.000000
The number of free parameters (to be estimated):
Lambda: 10
Theta Epsilon: 12
Beta: 0
Psi: 2
Matrix elements to be estimated:
1) LY 1 1
2) LY 2 1
3) LY 4 1
4) LY 5 1
5) LY 6 1
6) TE 1 1
7) TE 2 2
8) TE 3 3
9) TE 4 4
10) TE 5 5
11) TE 6 6
12) PSI 1 1
13) LY 7 2
14) LY 8 2
15) LY 10 2
16) LY 11 2
17) LY 12 2
18) TE 7 7
19) TE 8 8
20) TE 9 9
21) TE 10 10
22) TE 11 11
23) TE 12 12
24) PSI 2 2
*********************************************************************************
FULL SAMPLE RESULTS
Fit: 9.4761677482e-02 N: 1266
Chi-square goodness-of-fit: 1.1987352201e+02 df: 18
Parameter MLEs and Normal-theory Asymptotic Standard Errors
parameter MLE SE t-statistic
LY 1 1 (1) 3.1507462967e-01 6.2689467800e-02 5.0260e+00
LY 2 1 (2) 8.0980369853e-01 1.1446037460e-01 7.0750e+00
LY 4 1 (3) 1.4648927587e+00 1.0343642214e-01 1.4162e+01
LY 5 1 (4) 1.3508412103e+00 9.7220950727e-02 1.3895e+01
LY 6 1 (5) 1.5426183076e+00 1.1326660201e-01 1.3619e+01
TE 1 1 (6) 6.2483906627e-02 2.5196620097e-03 2.4799e+01
TE 2 2 (7) 2.0255855460e-01 8.2873294230e-03 2.4442e+01
TE 3 3 (8) 3.3493164455e-02 1.8340267667e-03 1.8262e+01
TE 4 4 (9) 8.4656039521e-02 4.3724327275e-03 1.9361e+01
TE 5 5 (10) 5.8680539919e-02 3.2668467155e-03 1.7962e+01
TE 6 6 (11) 9.8278331208e-02 5.0060147745e-03 1.9632e+01
PSI 1 1 (12) 2.0129251941e-02 2.0884754080e-03 9.6383e+00
LY 7 2 (13) 1.2566776402e+00 1.7459168471e-01 7.1978e+00
LY 8 2 (14) 6.2461207687e-01 1.9809696426e-01 3.1531e+00
LY 10 2 (15) 1.9301336572e+00 2.2363750687e-01 8.6306e+00
LY 11 2 (16) 2.1802223660e+00 2.7873524001e-01 7.8218e+00
LY 12 2 (17) 2.4090377847e+00 2.9726844901e-01 8.1039e+00
TE 7 7 (18) 7.2825681180e-02 3.2995098108e-03 2.2072e+01
TE 8 8 (19) 1.9322829719e-01 7.7686986355e-03 2.4873e+01
TE 9 9 (20) 5.0109899701e-02 2.2361521148e-03 2.2409e+01
TE 10 10 (21) 8.0078923460e-02 4.4090189287e-03 1.8163e+01
TE 11 11 (22) 1.1405114293e-01 5.8607538188e-03 1.9460e+01
TE 12 12 (23) 9.1191773223e-02 5.6473061981e-03 1.6148e+01
PSI 2 2 (24) 7.6339754139e-03 1.5278326890e-03 4.9966e+00
*********************************************************************************
BOOTSTRAP RESULTS
Simple Percentile intervals: N= 1266, bootstrap replication = 1000 (used = 1000)
Percentile intervals are NOT adjusted for nonconvergence.
95% 90%
1) LY 1 1 (1.09606978e-01, 5.53128908e-01) (1.46435071e-01, 5.09776489e-01)
2) LY 2 1 (4.07021113e-01, 1.25077746e+00) (4.77034154e-01, 1.18648353e+00)
3) LY 4 1 (1.14794896e+00, 1.86567873e+00) (1.18663337e+00, 1.79705931e+00)
4) LY 5 1 (1.00671100e+00, 1.75369061e+00) (1.06580530e+00, 1.68445585e+00)
5) LY 6 1 (1.15250934e+00, 2.01419445e+00) (1.20562376e+00, 1.93478417e+00)
6) TE 1 1 (5.32853184e-02, 7.11425583e-02) (5.49976494e-02, 6.97511588e-02)
7) TE 2 2 (1.80985941e-01, 2.19627149e-01) (1.84506120e-01, 2.17131338e-01)
8) TE 3 3 (2.62126164e-02, 4.03801943e-02) (2.73918244e-02, 3.92530951e-02)
9) TE 4 4 (6.81996496e-02, 9.90582002e-02) (7.10863644e-02, 9.68507105e-02)
10) TE 5 5 (4.75932632e-02, 7.02289817e-02) (4.92014602e-02, 6.86672252e-02)
11) TE 6 6 (8.04125628e-02, 1.16083396e-01) (8.26455966e-02, 1.12060560e-01)
12) PSI 1 1 (1.31627727e-02, 3.03992356e-02) (1.37808834e-02, 2.84558129e-02)
13) LY 7 2 (8.26182484e-01, 1.89594943e+00) (8.97615151e-01, 1.79829060e+00)
14) LY 8 2 (1.26718516e-01, 1.23135786e+00) (2.11189699e-01, 1.11846669e+00)
15) LY 10 2 (1.47901882e+00, 2.71086876e+00) (1.53196839e+00, 2.57069968e+00)
16) LY 11 2 (1.50817247e+00, 3.20145158e+00) (1.62086980e+00, 3.01332131e+00)
17) LY 12 2 (1.71496082e+00, 3.63653316e+00) (1.81833341e+00, 3.32573759e+00)
18) TE 7 7 (6.44343566e-02, 8.08222890e-02) (6.58427640e-02, 7.92012693e-02)
19) TE 8 8 (1.76907209e-01, 2.05545682e-01) (1.79662752e-01, 2.03538353e-01)
20) TE 9 9 (4.30607859e-02, 5.69689310e-02) (4.40589438e-02, 5.57237198e-02)
21) TE 10 10 (6.53595758e-02, 9.37222352e-02) (6.76052666e-02, 9.12320950e-02)
22) TE 11 11 (9.90016200e-02, 1.26771416e-01) (1.00748576e-01, 1.24486670e-01)
23) TE 12 12 (7.63728705e-02, 1.04562735e-01) (7.90106375e-02, 1.02631755e-01)
24) PSI 2 2 (3.74993062e-03, 1.25984521e-02) (4.33420419e-03, 1.15050215e-02)
BCa intervals and bootstrap goodness-of-fit test with NO adjustments for
nonconvergence. These intervals will be larger than or equal to the intervals
produced with adjustments.
BCa results: N = 1266, bootstrap replications = 1000 (used = 1000)
proportion of bootstraps that are not usable: 0.0000
BCa confidence intervals:
95% 90%
1) LY 1 1 (9.85561641e-02, 5.44245374e-01) (1.36509185e-01, 4.97200756e-01)
2) LY 2 1 (4.27774596e-01, 1.26188950e+00) (4.90131559e-01, 1.19176638e+00)
3) LY 4 1 (1.15859105e+00, 1.89431431e+00) (1.20076702e+00, 1.82251260e+00)
4) LY 5 1 (1.01623272e+00, 1.77576540e+00) (1.06830900e+00, 1.71104778e+00)
5) LY 6 1 (1.15250934e+00, 2.01419445e+00) (1.20562376e+00, 1.93478417e+00)
6) TE 1 1 (5.50680023e-02, 7.24154671e-02) (5.63669538e-02, 7.14403270e-02)
7) TE 2 2 (1.82592949e-01, 2.20190794e-01) (1.86615349e-01, 2.18118369e-01)
8) TE 3 3 (2.74360082e-02, 4.20647216e-02) (2.82831810e-02, 4.05537589e-02)
9) TE 4 4 (7.00801703e-02, 1.00360906e-01) (7.19861394e-02, 9.77005894e-02)
10) TE 5 5 (4.87079351e-02, 7.11532683e-02) (5.03794647e-02, 6.97846535e-02)
11) TE 6 6 (8.22478188e-02, 1.18077341e-01) (8.43420692e-02, 1.14562540e-01)
12) PSI 1 1 (1.30416156e-02, 3.03309814e-02) (1.37113681e-02, 2.81950067e-02)
13) LY 7 2 (8.21907796e-01, 1.88800763e+00) (8.90727569e-01, 1.78528412e+00)
14) LY 8 2 (1.36243141e-01, 1.24669945e+00) (2.11827080e-01, 1.12321986e+00)
15) LY 10 2 (1.45232872e+00, 2.66229208e+00) (1.51483037e+00, 2.53107589e+00)
16) LY 11 2 (1.50318254e+00, 3.19607501e+00) (1.61617119e+00, 3.00949548e+00)
17) LY 12 2 (1.68970562e+00, 3.58905247e+00) (1.78595887e+00, 3.28906545e+00)
18) TE 7 7 (6.44384467e-02, 8.08891489e-02) (6.58507043e-02, 7.92017352e-02)
19) TE 8 8 (1.77927717e-01, 2.05903689e-01) (1.80129807e-01, 2.03985570e-01)
20) TE 9 9 (4.34847826e-02, 5.77356859e-02) (4.46791253e-02, 5.62898964e-02)
21) TE 10 10 (6.60853488e-02, 9.40577597e-02) (6.85246126e-02, 9.17815716e-02)
22) TE 11 11 (9.91145451e-02, 1.27431398e-01) (1.01282437e-01, 1.24979302e-01)
23) TE 12 12 (7.72019046e-02, 1.04920998e-01) (7.97551953e-02, 1.03095841e-01)
24) PSI 2 2 (3.86684196e-03, 1.27316205e-02) (4.47361754e-03, 1.17364936e-02)
Goodness-of-fit tests:
The ML Fit: 0.0947616774817792
The 95 Percent Bound: 0.08190699 diff: -0.01285469
The 90 Percent Bound: 0.06830080 diff: -0.02646087
The Position of the ML Fit Statistic: 0.97700000
Fit value at Position: 0.09362013 diff: -0.00114155
Fit value Below Position: 0.09353217 diff: -0.00122951
BCa intervals and bootstrap goodness-of-fit test WITH adjustments for
nonconvergence. These intervals will be smaller than or equal to the intervals
produced without adjustments.
BCa results: N = 1266, bootstrap replications = 1000 (used = 1000)
proportion of bootstraps that are not usable: 0.0000
BCa confidence intervals:
95% 90%
1) LY 1 1 (9.85561641e-02, 5.44245374e-01) (1.36509185e-01, 4.97200756e-01)
2) LY 2 1 (4.27774596e-01, 1.26188950e+00) (4.90131559e-01, 1.19176638e+00)
3) LY 4 1 (1.15859105e+00, 1.89431431e+00) (1.20076702e+00, 1.82251260e+00)
4) LY 5 1 (1.01623272e+00, 1.77576540e+00) (1.06830900e+00, 1.71104778e+00)
5) LY 6 1 (1.15250934e+00, 2.01419445e+00) (1.20562376e+00, 1.93478417e+00)
6) TE 1 1 (5.50680023e-02, 7.24154671e-02) (5.63669538e-02, 7.14403270e-02)
7) TE 2 2 (1.82592949e-01, 2.20190794e-01) (1.86615349e-01, 2.18118369e-01)
8) TE 3 3 (2.74360082e-02, 4.20647216e-02) (2.82831810e-02, 4.05537589e-02)
9) TE 4 4 (7.00801703e-02, 1.00360906e-01) (7.19861394e-02, 9.77005894e-02)
10) TE 5 5 (4.87079351e-02, 7.11532683e-02) (5.03794647e-02, 6.97846535e-02)
11) TE 6 6 (8.22478188e-02, 1.18077341e-01) (8.43420692e-02, 1.14562540e-01)
12) PSI 1 1 (1.30416156e-02, 3.03309814e-02) (1.37113681e-02, 2.81950067e-02)
13) LY 7 2 (8.21907796e-01, 1.88800763e+00) (8.90727569e-01, 1.78528412e+00)
14) LY 8 2 (1.36243141e-01, 1.24669945e+00) (2.11827080e-01, 1.12321986e+00)
15) LY 10 2 (1.45232872e+00, 2.66229208e+00) (1.51483037e+00, 2.53107589e+00)
16) LY 11 2 (1.50318254e+00, 3.19607501e+00) (1.61617119e+00, 3.00949548e+00)
17) LY 12 2 (1.68970562e+00, 3.58905247e+00) (1.78595887e+00, 3.28906545e+00)
18) TE 7 7 (6.44384467e-02, 8.08891489e-02) (6.58507043e-02, 7.92017352e-02)
19) TE 8 8 (1.77927717e-01, 2.05903689e-01) (1.80129807e-01, 2.03985570e-01)
20) TE 9 9 (4.34847826e-02, 5.77356859e-02) (4.46791253e-02, 5.62898964e-02)
21) TE 10 10 (6.60853488e-02, 9.40577597e-02) (6.85246126e-02, 9.17815716e-02)
22) TE 11 11 (9.91145451e-02, 1.27431398e-01) (1.01282437e-01, 1.24979302e-01)
23) TE 12 12 (7.72019046e-02, 1.04920998e-01) (7.97551953e-02, 1.03095841e-01)
24) PSI 2 2 (3.86684196e-03, 1.27316205e-02) (4.47361754e-03, 1.17364936e-02)
Goodness-of-fit tests:
The ML Fit: 0.0947616774817792
The 95 Percent Bound: 0.08190699 diff: -0.01285469
The 90 Percent Bound: 0.06830080 diff: -0.02646087
The Position of the ML Fit Statistic: 0.97700000
Fit value at Position: 0.09362013 diff: -0.00114155
Fit value Below Position: 0.09353217 diff: -0.00122951